aaron 026f68fb41 a couple of quick name changes ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@976 348d0f76-0448-11de-a6fe-93d51630548a		2009-06-10 20:02:52 +00:00
..
gatk	1. downsample when there are too many mismatching reads (needs perfecting)	2009-06-10 19:55:42 +00:00
indels	border case bug fixes	2009-06-09 04:33:15 +00:00
samples	Hypen-style xml output. Much sexier.	2009-05-08 01:04:40 +00:00
somaticcoverage	a couple of quick name changes	2009-06-10 20:02:52 +00:00
utils	Changed method name from applyFourBaseDistributionPrior to applySecondBaseDistributionPrior. 'Cause that's how I roll.	2009-06-10 08:21:22 +00:00
ValidateSAM.java	Update to latest version of picard. Change imports in all classes dependent on picard public from import edu.mit.broad.picard... to import net.sf.picard...	2009-05-28 20:13:01 +00:00