hanna 862b8a6787 intervals_file + genome_loc => intervals. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@659 348d0f76-0448-11de-a6fe-93d51630548a		2009-05-12 01:04:18 +00:00
..
dataSources	Fixes to try and speed up unmapped read traversals. Still not nearly as fast as they should be, but the next step would be to modify samtools code.	2009-05-05 18:17:07 +00:00
executive	Add tag to ignore node class.	2009-04-30 20:27:34 +00:00
iterators	Changes to the interface to the simple data source rippled out to a bunch of files.	2009-04-30 20:35:56 +00:00
traversals	Cleanup in preparation for ByLoci traversal. Also did some work minimizing unit tests.	2009-05-08 21:27:54 +00:00
GATKArgumentCollectionTest.java	intervals_file + genome_loc => intervals.	2009-05-12 01:04:18 +00:00
OutputTrackerTest.java	N-way parallelism. Works for small test cases. Untested for large test cases.	2009-05-01 19:34:09 +00:00