gatk-3.8/protected/java
Eric Banks 23c6aee236 Added in some basic unit tests for polyploid consensus creation in RR.
- Uncovered small bug in the fix that I added yesterday, which is now fixed properly.
- Uncovered massive general bug: polyploid consensus is totally busted for deletions (because of call to read.getReadBases()[readPos]).
  - Need to consult Mauricio on what to do here (are we supporting het compression for deletions?  (Insertions are definitely not supported)
2013-02-05 10:35:45 -05:00
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src/org/broadinstitute/sting Added in some basic unit tests for polyploid consensus creation in RR. 2013-02-05 10:35:45 -05:00
test/org/broadinstitute/sting Added in some basic unit tests for polyploid consensus creation in RR. 2013-02-05 10:35:45 -05:00