\documentclass[10pt]{article} \usepackage[margin=1in, paperwidth=10.0in, paperheight=7.5in]{geometry} \usepackage{multicol} \usepackage{fancyhdr} \pagestyle{fancy} \begin{document} \lhead{\bfseries{\Large{1,000 Genomes Data Processing Report - $population$ samples}}} \rhead{} \chead{} \begin{multicols}{2} \begin{tabular}{|r|l|} \multicolumn{2}{l}{\bfseries{Project Summary ($study_id$)}} \\ \hline Used samples & $used_samples$ \\ Unused samples & $unused_samples$ \\ \hline \end{tabular} \begin{tabular}{|r|l|} \multicolumn{2}{l}{\bfseries{Sequencing Summary}} \\ \hline Sequencers & $sequencers$ \\ Used lanes & $used_lanes$ \\ Unused lanes & $unused_lanes$ \\ Used lanes/sample & $used_lanes_per_sample$ \\ Lane parities & $lane_parities$ \\ Read lengths & $read_lengths$ \\ Sequencing dates & $sequencing_dates$ \\ \hline \end{tabular} \begin{tabular}{|r|l|l|} \multicolumn{3}{l}{\bfseries{Bases Summary (excluding unused lanes/samples)}} \\ \hline & Per lane & Per sample \\ \hline Reads & $reads_per_lane$ & $reads_per_sample$ \\ Used bases & $used_bases_per_lane$ & $used_bases_per_sample$ \\ Coverage & $coverage_per_lane$ & $coverage_per_sample$ \\ \% loci $>$ 1x covered & $loci_gt_1x_per_lane$ & $loci_gt_1x_per_sample$ \\ \% loci $>$ 2x covered & $loci_gt_2x_per_lane$ & $loci_gt_2x_per_sample$ \\ \% loci $>$ 3x covered & $loci_gt_3x_per_lane$ & $loci_gt_3x_per_sample$ \\ \% loci $>$ 4x covered & $loci_gt_4x_per_lane$ & $loci_gt_4x_per_sample$ \\ \hline \end{tabular} \begin{tabular}{|r|l|l|} \multicolumn{3}{l}{\bfseries{Variant Summary}} \\ \hline & Found & Est. FP rate \\ \hline All SNPs & $all_snps_found$ & $all_snps_fprate$ \\ Known SNPs & $known_snps_found$ & $known_snps_fprate$ \\ Novel SNPs & $novel_snps_found$ & $novel_snps_fprate$ \\ \hline \end{tabular} \end{multicols} %\lfoot{kiran@broadinstitute.org} %\cfoot{} %\rfoot{} \end{document}