package org.broadinstitute.sting.utils; import org.broadinstitute.sting.utils.exceptions.GATKException; import java.util.Iterator; /** * Created by IntelliJ IDEA. * User: fromer * Date: Aug 19, 2010 * Time: 9:33:54 AM * To change this template use File | Settings | File Templates. */ /* * CardinalityCounter object allows user to iterate over all assignment of arbitrary-cardinality variables. */ public class CardinalityCounter implements Iterator, Iterable { private int[] cards; private int[] valList; private boolean hasNext; public CardinalityCounter(int[] cards) { this.cards = cards; this.valList = new int[cards.length]; for (int i = 0; i < cards.length; i++) { if (this.cards[i] <= 0) throw new IllegalArgumentException("CANNOT have zero cardinalities!"); this.valList[i] = 0; } this.hasNext = true; } public boolean hasNext() { return hasNext; } public int[] next() { if (!hasNext()) throw new GATKException("CANNOT iterate past end!"); // Copy the assignment to be returned: int[] nextList = new int[valList.length]; for (int i = 0; i < valList.length; i++) nextList[i] = valList[i]; // Find the assignment after this one: hasNext = false; int i = cards.length - 1; for (; i >= 0; i--) { if (valList[i] < (cards[i] - 1)) { valList[i]++; hasNext = true; break; } valList[i] = 0; } return nextList; } public void remove() { throw new RuntimeException("Cannot remove from CardinalityCounter!"); } public Iterator iterator() { return this; } }