GenomeAnalysisTK org.broadinstitute.sting.gatk.CommandLineGATK org.broadinstitute.sting.gatk.walkers.DepthOfCoverage org.broadinstitute.sting.gatk.walkers.PileupWalker org.broadinstitute.sting.gatk.walkers.PrintReadsWalker java/src/org/broadinstitute/sting/gatk/examples/HelloWalker.java java/src/org/broadinstitute/sting/gatk/examples/build.xml