AnalyzeCovariates org.broadinstitute.sting.analyzecovariates.AnalyzeCovariates org.broadinstitute.sting.analyzecovariates.AnalyzeCovariates org.broadinstitute.sting.gatk.walkers.recalibration.DinucCovariate org.broadinstitute.sting.gatk.walkers.recalibration.PositionCovariate org.broadinstitute.sting.gatk.walkers.recalibration.MinimumNQSCovariate org.broadinstitute.sting.gatk.walkers.recalibration.MappingQualityCovariate org.broadinstitute.sting.gatk.walkers.recalibration.QualityScoreCovariate org.broadinstitute.sting.gatk.walkers.recalibration.PrimerRoundCovariate org.broadinstitute.sting.gatk.walkers.recalibration.CycleCovariate org.broadinstitute.sting.gatk.walkers.recalibration.ReadGroupCovariate