#!/usr/bin/env python import os #justPrintCommands = False def cmd(cmd_str, farm_queue=False, output_head=None, just_print_commands=False, outputFile = None): # if farm_queue is non-False, submits to queue, other if farm_queue: if outputFile <> None: farm_stdout = outputFile elif output_head <> None: farm_stdout = output_head+".stdout" else: farm_stdout = None cmd_str = "bsub -q "+farm_queue+" "+cmd_str if farm_stdout <> None: cmd_str += " -o " + farm_stdout print ">>> Farming via "+cmd_str else: print ">>> Executing "+cmd_str if just_print_commands or (globals().has_key("justPrintCommands") and globals().justPrintCommands): return -1 else: # Actually execute the command if we're not just in debugging output mode status = os.system(cmd_str) if not farm_queue: print "<<< Exit code:", status,"\n" return status