4.0.0
org.broadinstitute.gatk
gatk-root
3.7-SNAPSHOT
../../public/gatk-root
VectorPairHMM
pom
Vectorized PairHMM native libraries
Builds a GNU/Linux x86_64 library of VectorPairHMM using icc (Intel C++ compiler). During install, copies it into gatk-utils. Neither tested nor expected to work on any other platform.
UTF-8
${sourceEncoding}
${sourceEncoding}
${project.basedir}/../..
${gatk.basedir}/public/gatk-utils
${gatk-utils.basedir}/src/main/resources/org/broadinstitute/gatk/utils/pairhmm
org.apache.maven.plugins
maven-enforcer-plugin
display-info
validate
org.codehaus.mojo
exec-maven-plugin
exec
compile
make
src/main/c++
${java.home}
${project.build.directory}
org.apache.maven.plugins
maven-install-plugin
true
org.apache.maven.plugins
maven-resources-plugin
default-install
copy-resources
install
${pairhmm.resources.directory}
${project.build.directory}
**/*
com.google.code.sortpom
maven-sortpom-plugin
false
custom_1
\n
${sourceEncoding}
true
scope
4
false