##fileformat=VCFv4.0
##ALT=<ID=DEL,Description="Deletion">
##FILTER=<ID=LowQual,Description="Genotype call confidence below LOD 1.3">
##FORMAT=<ID=CN,Number=1,Type=Integer,Description="Copy number genotype for imprecise events">
##FORMAT=<ID=CNQ,Number=1,Type=Float,Description="Copy number genotype quality for imprecise events">
##FORMAT=<ID=FT,Number=-1,Type=String,Description="Per-sample genotype filter, PASS for called genotypes or list of excluding filters">
##FORMAT=<ID=GL,Number=3,Type=Float,Description="Genotype Likelihoods">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
##INFO=<ID=BKPTID,Number=-1,Type=String,Description="ID of the assembled alternate allele in the assembly file">
##INFO=<ID=CIEND,Number=2,Type=Integer,Description="Confidence interval around END for imprecise variants">
##INFO=<ID=CIPOS,Number=2,Type=Integer,Description="Confidence interval around POS for imprecise variants">
##INFO=<ID=DBRIPID,Number=1,Type=String,Description="ID of this element in DBRIP">
##INFO=<ID=DBVARID,Number=1,Type=String,Description="ID of this element in DBVAR">
##INFO=<ID=DGVID,Number=1,Type=String,Description="ID of this element in Database of Genomic Variation">
##INFO=<ID=END,Number=1,Type=Integer,Description="End coordinate of this variant">
##INFO=<ID=HOMLEN,Number=-1,Type=Integer,Description="Length of base pair identical micro-homology at event breakpoints">
##INFO=<ID=HOMSEQ,Number=-1,Type=String,Description="Sequence of base pair identical micro-homology at event breakpoints">
##INFO=<ID=IMPRECISE,Number=0,Type=Flag,Description="Imprecise structural variation">
##INFO=<ID=MEINFO,Number=4,Type=String,Description="Mobile element info of the form NAME>
##INFO=<ID=METRANS,Number=4,Type=String,Description="Mobile element transduction info of the form CHR>
##INFO=<ID=NOVEL,Number=0,Type=Flag,Description="Indicates a novel structural variation">
##INFO=<ID=SVLEN,Number=-1,Type=Integer,Description="Difference in length between REF and ALT alleles">
##INFO=<ID=SVMETHOD,Number=-1,Type=String,Description="Type of approach used to detect SV: RP (read pair), RD (read depth), SR (split read), or AS (assembly)">
##INFO=<ID=SVTYPE,Number=1,Type=String,Description="Type of structural variant">
##INFO=<ID=VALIDATED,Number=0,Type=Flag,Description="Validated by PCR, Assembly or Microarray">
##INFO=<ID=VALMETHOD,Number=-1,Type=String,Description="Type of validation: CGH, PCR, SAV (superarray), CAP (capture-array), or ASM (assembly)">
##fileDate=20100625
##reference=1000GenomesPilot-NCBI36
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO
1	61855445	P1_M_061510_1_174	TCTTCTTTTACTTTAGAATTGAAAAATGATAGTGGCCCTGGACCATCAGCAGCCATCTTTCTCCCCTCATGAAAAGAGCACATCCATGGATTTAACTTAACATTAGAGGAGGTACAATGAGAATATGGAAATAGAGCCTAAATAATTTTATTTTGCCCCTAGATCTAGCATATGAGAAGCAAATATGTTCTGCATTTCCCAGTTTATAAGCCAATAAATTCTCCTTTGTGCTTAAAGCATTCGAGTTACATTCTGACACTTGCAACCAAGAATCCTGACAAATACATCTTTGGAATTTGTATCTCCTCTGAATTACAGTGACTGGTACATAGGACTCAAAAATATGTACATAGGACTGGTACATAGTACAGTGACTGGTACATAGGACTTAAAAATATGTTACATGGATGAATGAACAGCTTAGCAAAAGGTCTGGGAATGACCTCTGCGTAAAGTGAATTTCTGCTGCCCCCAAAACTGCCTAGTGTGTGCTGTTCATCAACAATGCACCCACTTCTTGCACTTTGATGTAGAGAGGCCATACCACCTGTGTCTACATGTGGTTACTACTTAAACAATACTTACATAGTTAGCGAGTGGCCAAAATGTCTATTAATCTGTAAACACTTGGAAAGAATCCAGTTTGTATTCTTATTTTCCTGGTTTAAAGTGCTAAATGAACCAAAAGTTAGGGAAGCTCTTTTCAGAAAAGCCATCATGCCTGATCCAATCCACTGAACAAAAGATTTAGGAGCTCTCCATCTGATATTAGTCTTTGGAATAGCCTTGACTTAAGTGTGCTTGAGCCTGTGACTGTGGGTGAAAGTGTGTGAGCGATGATTTTC	T	.	.	BKPTID=BROAD_C1.4526;END=61856289;HOMLEN=6;HOMSEQ=CTTCTT;SVLEN=-844;SVTYPE=DEL;VALIDATED;DBVARID=esv10947;VALMETHOD=SAV,ASM;SVMETHOD=SR,RP
1	61886001	P1_M_061510_1_175	GGGCTTGAGTATCAGAAGATTTTGGTATCTGAGGGGGTCCTGGAACCAATCCCCTGAGAATATCGAGGGAGGATCATTCAATAAAGTACAATGCTAGAGGAAGTCCAAAGTTATGTTGGGAGCATTGTGTGAGGGCACCTAACTTCATCTACAGATCAAAAAAACTTTCCTGAGAAAGTGATATTTAGATTGATAAGAATTTGCAAATAGTGAAGGAAGAGCATTTCAGGCAGAGGGAACAGCATGTTTGAAGGCATGGAGGTGAGAGAAAATTTAGATATTTAACAAATATTTACTGAGTTTTCCCATTGCCAGGCTCTGTATTGGGTGGAAGACCCTGGCACGGAGGAGACTACACCAGGGGACACAGATATGGGAGCAAATGACTTCAAAATAATGTGGTAGGAGCTCTAACAGTGGTCAGCACCGGGCACCAGAGGAGCACTGAAGAGATTGCCTAATCCATCCCAGAAGGGATGGTATTGGAGCTGAGCCTTGACAGACGAGTGAGAATAAAGAAGGAGATGTGGCAAGGTGGGAGACCTGGTCCTTGCCTCTATGGACATAGTCTAGTGGGGAAGTTGGCAAGCTGACTGTATAATACTGATTATAGTGCAGTACAATAAGTGTCTAGGAACAGTGCCTAGCACATAGTAGGCACTTATTAAATATCTGTTGAATAAATTAATGTATAAATGCTGTATAATACTGATTATAGCGCAGAACAATAAGTGTCTGGGAACAGTGTCTGGCACATAGTAGGCACTCGTTAAATATGTGCTGAATAAATGAATGTATAAATGCTGTATGATACTGATTATCATAGAGCACAAAAACTGTCTGGGAACAGTGTCTGGCACATAGTAGGCATTCATTAAACATGTGTTGAATGAATGAATTTATAAATGCTGTGCTAGCGGTGGATACAATCAGGTAGTCCTAGAAACAATTGGGTACTAAATTAAGAGTTACCAACTCCAAGTGCCCATAGAGCTCAGAGCACAAAGAGCTCCAAAAGGGTGAAACATGAACCAGACTTGAAGGAAGGATCAACTCTGTGGGATGAAGGTCGGTAGACATTCATCCTGAGAAGGAAAAACTACCATTGACACCGCTAGAAGTAAAGGGCGAAGAAAACAGGAAATGAGCACAAAGCAGGATTTCTTAATCCAGGGTCCATGGTACTTCTGGGGCTTCTATGAAACCCCAGAGATTATAAGCAAAATCCTAGGTATGTATGAGAAAGGTTATTTTACTGGGGAAAAAGACTAGAACTTTCGTGAAATAGTCAAAGGAATCCAATAAGCCTAAGTAGGTCAAGACTGTCTCGGGGAGAACAGTTAACCTACTTCAGATAGCCTGTGAATCACTTCATTCGTGACAAATAATTATGCCAATGGACTCCCAACACAAAAAACCTTGGGACTGAGTGAGCAGCAGTGGTTTCAGCCCTGCCTTTAAGTGGCATTTTTAGCATTTCCTTGCTGCTGCCTATCAATCCAGACCTATCCACGTTGTCAGGGTATCCTTAGCAGCTGATGGAGATGCCTCTTTCCAAAGGCAATTTACATGCACCAAAGTCCTTCCTCCTAATGATTTTCCAGTAGGGACAATTCCCTCTTGTTAGAATGTCCATTGTTTACATTTATCTGATCTTTTCTCACAATTTCCATTGAGCAGCAGTTGCTACAACCACCTGAGCATCAAATGGGCAATTAATTGGAACAGATTTAATAAATGTACTAGAGAAGGGAGCTGTATGTTTATGGACTACAGTCCTTTCATGGTCATGCATAATGGACCAGACACTTTTCCACCCAGCTGCTTATGCTACCACAGTGAACACAAAATTTACATACCTGGAAGAAAACAGCTTCTGAAACATTATTAATGAATGTAGCGAATTTGTCTGTTAGGATAAGCTATGGTATCTCCATGGCTTAACTTTGCACCATCCTATTCTTGGTTAAAAATATCTACAGTGTCTCCCCTTACTGTCTTCTTTCTAAAATATAATTTTATATTTTAATTGAAGTGGCCCTTTTTCAACCAAGAATCAGGGCGTTGTGAAAGAGCAATGTGCATTCCCCCTGTTTGAAAGCACAGGGAATGTTTAAAGTTTTTAGAATACAAAATAACTTTAGAGCGGAAACCTTAGCAACTAAACTATACTAGTAGGAGTGTAATGTTCAAAGAGGGGGACAATGGTCCCAATCCCCTCAGGGTTAGACACACCACATAAGAAATATTTGTATCCAGTACTTGATGCCACATCCTTCAAGGGATAACCATAGGCCCATGAGGCTGGTAGGTGCTCTCAAAGTGAAGGCAAATGGCAATGGCTAACATTCCATGGAGTTCTTGTTAAGTGCCAAGCACTGTCCATTTAATCTTCACAACTACCCCATAAATAAACAATTAGGGGCCGGGCGCAGTGGCTCACGCTTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGAATCACGAGGTCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAGATACAAAAAATTAGCTGGGCATAGTGGTGGGTGCCTATAATCCCAGCTACTTGGGAGGCTGGGGCAGGAGAATTGCTTGAACCTGTGAGGCGGAGGTTGCAGTGAGCCAAGATCATGCCACCGCACTCCAGACTGGGTGACAGAGCAAGACTCTGTCCCAAAAAAAAAAAAAAAAGAAGAAAAAAAAAGAAACTATTAGGTTGGTGCAAAAGTAATCGCAGTTTTGCCATTGAAATTAATGGCAAAAACCTCAATTACTTTTGCACCAAGTTAATATTATTATTATCCCCATTTTACAAATAAAGAAACTCAGGGTCATGCACATAGTAAGTGAAGGAACTCAGAGTGCCACTCAGTTCTGTCTGATTTCCATGGACCCTCAGTGTAAGCAGTTGGTATATTTTTAATTAATCTTGCTAGAGATAATTGGTAATTATGACACTGAAATCATTGCAACTGTGTTGTGTGTGCATTAGTCTTGTCTCACCAATCAGAATAAACACACTGTGAAGGCAGTGACCACATTAATTACACACGTTTACTTTCCAGGCTAAGCACAGAGCTGGACTTAAGCAGGTCTTTCTTACATCTTTTGCTGAATAAAATAACCCATTTTGAAATGCTTCAAAAACCAATTTACCCATGAGATTATTGAAGGTGTTGGGGGAAAGGACACTCTGGGGATATGAATCGTTAGGGACATTTTAGAGGACACTTTGTTCATAATTATCAAAATGTAAAATGTGTAAACCCCTTGACCCACAGTTATGTGTCTAGGAGTCTACTCAAACTATTCTATAGAAATGCTGATACATATATGCAAAAATAGATAGAACAATGTATAAAGATACATACATATATATGCAAAGGTATATAATATATATACACCTAAATACGTATATAAATATTCATATATTTCTTTTTTGTTACAGTTCTGTTTATTTTAGCAAAATAAGGAAGAAACAACTTAATTGCCCATCAGCAGGGGAATTGTTAAAAAATTAGGCTACAACCACACCTTACAATACAATATAGCCACTAAAATACTGGAGTAGATGTATTAGGTTAACCATATGAAACTGCCAATGTTTTACTGCTATTGACATAAATAACAATTTCATATGCTTCAACGTAATATATGTACAGATGTGAAAAGATTTATAAGAATATTGGTAGTTGAAAAAAGCAAGTTGCAGAACGGTACCTACAGTATGGCATATTTATGTTTAAGACATAAGACAAACCTATAGAGAATAAACAAGAAAGGTACTCACCAAAAAATTAAGATGGTTATTTCTGGGCATGGCAGTTTTCATATTTTACTCTATAAAGTTCTACATCGTTTTACTCCTTCGTGATGAAAATTTTTTATAATTCCTTGGCTGGGCGCTGTGGCTCATGCTTGTAATTCCAGCACTTTGGGGGGCCGAGGCAGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTGGCCTACATGGTGAAACCGTGTCTCTACTAAAAATACAAAAATTAGCCGGCCTTGGTGGTGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGCAGAATCGCTTGAACCAGGGAGTCAGAGGTTGCAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGGTGACAGAGTGAGACTCTGTCTCAAAAAAAAAAAAAATGATACTTTTTAAAAAAAATTTGTTTAATACAACTGATTCCAAAGTATTTACATATTTTGTAAACATTATTTTTCTGATCTACAAGCTCCAAACTCTCAGGAACTCACCATGTTTCTTCACTGGGCCAGACAAGGAGAGTAATAAAGAATTAACCTTAATTATTCAAAGAAATCCAGATGGTGAGAAAAGAGTAAAAAGCAGAACTTCAACTTGGATTATCTCAAGACGATTGCCTGAAAATTTCCTGCTTATTTTTCCTGTTTAAACCTGGCTTTTCAGATGAATGTGAGGTGATCTGCTTTTCTGTGATTCAGAACTTCATAGAATTTGGCAGGCCAAGAATTACAAAGAAAGGAAGAAAATGAAAGGAGGAAAGTGAGGTAGTGAAAGAAGATGGGCAGAACTTGAGAAAGCTTTATAAAGTAACAGAACACACCCCACACCTTTTGGGAACAAAGGAACAAAGCTGATGGAACACAACAGATGTTCTCCTTCCCAAACCATAAAAGCATAACACTCTACAACTCCTCCTCACTCCAAGGAGTGGCCAATGCTCCTTACTGGAATATCTGTACAACAACGGTTTTTGTTGTTATTATTGTTTCCTTAGAACATGGATAAAAAGGAAAAAACACCATTACCAGAAACTGTCAAGTGTGGTTTAACTGTATTATCATTTTATCTTGATTCTTGTTTCTCCCTAACAAATTTCATTGAGGTATAGTTTACATACAACAACATGCACTCATTTTAATTGTACTCATCCATGAGCTTTGACAAAGCAATACACCTATGTCACCACCACTGTAATCAAGATATAGAACATTTCCAACATCCAAAAAGATTCCTTTGTGTCAACATGCTTTGTTCAGAGTGAAATTGAAAAAAAAAATTAAAATTAAACAAAAATGGCCAGGTATGGTGGCTATGCCTGTAATACCAGCACTTTGGGAGGCCCAGGCAGGCAGATCACTTGAGGCCAGGAGTTCGAGACAGCCTGGCCAACATGGAGAAACCTCATCTCTACTAAAAATACAAAAATTAGCTGGGTATGGTGGTGCACATCTGTAATCCCAGCTACTTGGGAGGCTGAGACACAAGAATCACTTGAACCCAGGAGGCAGAGGTTACAATGAGCCAAGACTGCACCACTGTGCTCCAGCCTGGGTGACAGAGCAAGACACCATCTCAAAACAAAACAAAAACAAAACCATTCCTTTGTGCTGGTCTATCCCCACTCACAACCCTAGCCCCTGGCAACCACTGGTTGGCTTTCTGTCACTCTAGATTAGATTTTTCTTTAGCATTTCATATAAGTAGAATCACATGGTATGAACTCTTCTGTATGTGACTTCTTTCACTCAGCATAATGTCGTCGAGATTCACCCATGTTGCTGTGTGCATTGATAGTTCACTCCTTTTTCTTGCTGAGTAGTATTCCACTGTGCGGCTAGGCCATGAGCACAGTTGATCCATTCGCCTATTGGTAAAACTTTGGTTGCTTCTAATCTTTGACTACTATGAGTAAAGCTGCTATCAGCATTCGTTTGACTCTTACTTTTGAAGTGAAATTCAAACCTAGCCGTTTTGGTGAGGCATGGAGATGAGAGATAAAACTAGCATTTTTAAGGCACCTACTAAGAGCTGGGTGCAGAAGATGAAAGACGAGGAAAGAGGGGAGCATTCTTTCCATCTCTAAAGAAAGCACAATAAGGATTGCCCTGGCCAGGCACGGTGGCTCAGGCCTGTAATCCCAGCACTTTGGGACACCGAGGTGGGCGGATCACCTGAGGTCAGGAGTTCGAGACCAGCCTGATCAATATGGTGAAACTCCGTTTCCACTAAAAATACAAAAATTAGCCAGGTGTGGTGGCGCTCCTGTAATCCCA	G	.	.	BKPTID=BROAD_C1.4527;END=61892108;HOMLEN=1;HOMSEQ=G;SVLEN=-6107;SVTYPE=DEL;VALIDATED;DBVARID=esv14181;VALMETHOD=SAV,ASM;SVMETHOD=SR,RP
1	61890311	P1_M_061510_1_781	A	<DEL>	.	.	CIEND=-380,1920;CIPOS=-1961,339;END=61891330;IMPRECISE;SVLEN=-1019;SVTYPE=DEL;VALIDATED;NOVEL;VALMETHOD=SAV;SVMETHOD=RD