2 Commits (fd1c72c15140762920524fd21b68de79041afb1e)

Author	SHA1	Message	Date
ebanks	1a299dd459	Require each filter or feature to declare whether or not they want mapping quality zero reads in the alignment context ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1486 348d0f76-0448-11de-a6fe-93d51630548a	2009-08-31 03:31:37 +00:00
ebanks	215e908a11	Reworking of the VariantFiltration system to allow for a windowed view of variants and inclusion of more data to the various filters. ... This now allows us to incorporate both the clustered SNP filter and a SNP-near-indels filter, which otherwise wasn't possible. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1484 348d0f76-0448-11de-a6fe-93d51630548a	2009-08-31 02:16:39 +00:00