3 Commits (f5fe28cc2890fa7385f511ae460f1f6dbcbeca81)

Author	SHA1	Message	Date
rpoplin	7f947f6b60	Updated recalibrator integration tests to use all three platforms as well as a bam with multi-platform reads intermingled. CountCovariates v2.0.1: Once again uses a read filter to filter out zero mapping quality reads. Added --sorted_output option to output the table recalibration file in sorted order ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2122 348d0f76-0448-11de-a6fe-93d51630548a	2009-11-23 19:51:36 +00:00
rpoplin	1d46de6d34	The old recalibrator is replaced with the refactored recalibrator. Added a version message to the logger output. These walkers start at version 2.0.0 ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2117 348d0f76-0448-11de-a6fe-93d51630548a	2009-11-23 14:58:33 +00:00
depristo	17ab1d8b25	General purpose merging iterator implementation ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1593 348d0f76-0448-11de-a6fe-93d51630548a	2009-09-12 19:06:15 +00:00