gatk-3.8

Author	SHA1	Message	Date
Mark DePristo	f0be7348be	Generalized handler to allow it to be used with any arbitrary class structure. DocumentedGATKFeature now includes a field for the group name. Build.xml works with public / private now.	2011-07-22 14:07:40 -04:00
Mark DePristo	453954182e	Generalized the documentation system to use a class-specific annotation and processor. Need to generalize and bug fix the system. But at a high level it's working now.	2011-07-22 13:18:33 -04:00
Mark DePristo	e922ebc29d	Missed this template for walker index.	2011-07-22 09:13:33 -04:00
Mark DePristo	81d0cab27e	Walker index html now emited.	2011-07-21 16:01:54 -04:00
Mark DePristo	e892489696	V2 of the document system. Now uses GATKDoc class to organize documentation for arguments. Arguments now listed by feature (required, optional, hidden, etc) and link to detailed information about the argument in the html Lots of code moving between Class and ClassDoc objects. Should be refactored into a single static utility class.	2011-07-21 15:20:34 -04:00
Mark DePristo	6fa17d86ae	Completely hacked together version of a FreeMarker + javadoc + custom doclet walker documentation generator	2011-07-21 00:18:07 -04:00