gatk-3.8

Author	SHA1	Message	Date
Mauricio Carneiro	116885a450	Removed the "Walker" suffix from all walkers that had it. * Did not touch archived walkers... those can be named whatever. * Kept abstract classes that end in Walker untouched (e.g. LocusWalker, ReadWalker, ...) * Renamed a few inner classes due to conflict when stripping off Walker from their outer classes: ContigStats, FlagStats and FastaStats.	2012-07-20 17:27:11 -04:00
Mauricio Carneiro	321afac4e8	Updates to the help layout. New style.css, new template for the walker auto-generated html. Short description is no longer repeated in the long description of the walker. Updated DiffObjectsWalker and ContigStatsWalker as "reference" documented walkers.	2011-07-26 19:29:25 -04:00
Mark DePristo	c6af4efcdc	Implemented see also and version header	2011-07-24 16:10:17 -04:00
Mark DePristo	b8db0510e0	Sytle sheet and common functions	2011-07-24 15:43:23 -04:00