Commit Graph

8 Commits (d697e0144fd976ca5ae2e9322e6eb4a44b7b8df2)

Author SHA1 Message Date
Karthik Gururaj 6e98e9e589 Removed g_haplotype* global variables in native code so that it works
with multi-threading in Java.
Modified VectorLoglessPairHMM.java so that jniInitializeRegion and
jniFinalizeRegion are empty
2014-03-06 22:08:35 -08:00
Karthik Gururaj a29777765d Binary library 2014-03-06 11:14:46 -08:00
Karthik Gururaj 27e640d640 Modified SSE4.1 and 4.2 checks with _may_i_use_cpu_feature() 2014-03-06 08:51:11 -08:00
Karthik Gururaj 37f107cb3a Using Mustafa's function _may_i_use_cpu_feature() for AVX check 2014-03-06 08:37:48 -08:00
Karthik Gururaj a893765ae2 Added license to Makefile 2014-03-03 09:11:02 -08:00
Karthik Gururaj 1b395a871a 1. Changed logger.info to logger.warn in PairHMMLikelihoodCalculationEngine.java
2. Committing the right set of files after rebase
2014-02-28 16:08:28 -08:00
Karthik Gururaj 53d5bc93b2 Native library part of git repo 2014-02-26 11:44:28 -08:00
Khalid Shakir d1a689af33 Added new utility files used by maven build, including the ant-bridge script. 2014-02-03 13:50:46 -05:00