gatk-3.8

Commit Graph

Author	SHA1	Message	Date
hanna	53fe9acf65	Make command-line arguments available in walker constructor, provide back door from walker into GATK itself, do some cleanup of output messages, and add some bug fixes. Command-line arguments in walkers are now feature-complete, but still a bit messy. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@203 348d0f76-0448-11de-a6fe-93d51630548a	2009-03-26 20:45:27 +00:00
hanna	5f9010116a	Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@201 348d0f76-0448-11de-a6fe-93d51630548a	2009-03-26 16:22:35 +00:00
hanna	63cd1fe201	Push core / playground lower into the tree. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@160 348d0f76-0448-11de-a6fe-93d51630548a	2009-03-23 23:19:54 +00:00

Author

SHA1

Message

Date

hanna

53fe9acf65

Make command-line arguments available in walker constructor, provide back door from

walker into GATK itself, do some cleanup of output messages, and add some bug fixes.
Command-line arguments in walkers are now feature-complete, but still a bit messy.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@203 348d0f76-0448-11de-a6fe-93d51630548a

2009-03-26 20:45:27 +00:00

hanna

5f9010116a

Collapse the walker hierarchy, in preparation for in-walker output streams less hokey walker args.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@201 348d0f76-0448-11de-a6fe-93d51630548a

2009-03-26 16:22:35 +00:00

hanna

63cd1fe201

Push core / playground lower into the tree.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@160 348d0f76-0448-11de-a6fe-93d51630548a

2009-03-23 23:19:54 +00:00

3 Commits (d115209e8602cdeb4aed978e54b5c81d048decf8)