hanna
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0250338ce7
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Basic use cases for merging BAM files with the new sharding system work.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2815 348d0f76-0448-11de-a6fe-93d51630548a
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2010-02-09 22:14:37 +00:00 |
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hanna
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e53432d54d
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Checkpoint for combining adjacent intervals into the same shard.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2782 348d0f76-0448-11de-a6fe-93d51630548a
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2010-02-05 02:48:02 +00:00 |
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hanna
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3f35e181d5
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Add an alternate implementation of the BAM file reader that keeps the entire index in memory. Initial revision of BAMFileStat, a tool to inspect BAM file BGZF blocks and index entries.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2769 348d0f76-0448-11de-a6fe-93d51630548a
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2010-02-03 19:48:15 +00:00 |