Commit Graph

4 Commits (cdfd07f9eb4e2ca18b2b6b10d00797cd3a156ebd)

Author SHA1 Message Date
David Roazen 292037dfda Rev picard, sam-jdk, and tribble
This is a necessary prerequisite for the org.broadinstitute.variant migration.

-Picard and sam-jdk go from version 1.67.1197 to 1.84.1337

-Picard-private goes from version 2375 to 2662

-Tribble goes from version 119 to 1.84.1337

-RADICALLY trimmed down the list of classes we extract from Picard-private
 (jar goes from 326993 bytes to 6445 bytes!)
2013-02-01 13:51:30 -05:00
Khalid Shakir b4b7ae1bd9 Revved Picard to incorporate tfennell's AsyncSAMFileWriter.
Removed DbSnpFileGenerator and related files as they were removed from PPP r2063 by ktibbett.
2011-12-06 10:37:42 -05:00
David Roazen baae381acb Revert "Merge branch 'master' of ssh://gsa1/humgen/gsa-scr1/gsa-engineering/git/unstable"
This reverts commit 039a6bb01f345322ce2be50ae3634308bb24e77e, reversing
changes made to b9c9973d1c638dfc9f8c19b5eb845e99844f9d29.
2011-07-19 18:38:53 -04:00
David Roazen 3c9497788e Reorganized the codebase beneath top-level public and private directories,
removing the playground and oneoffprojects directories in the process. Updated
build.xml accordingly.
2011-06-28 06:55:19 -04:00