gatk-3.8

Author	SHA1	Message	Date
Mark DePristo	c6af4efcdc	Implemented see also and version header	2011-07-24 16:10:17 -04:00
Mark DePristo	5e0fe2d0f9	Support for style.css via refactored common.html included in all files	2011-07-24 15:42:39 -04:00
Mark DePristo	d0ab6bf7a9	Now links to sub and superclass documentation, where possible.	2011-07-24 09:56:17 -04:00
Mark DePristo	7420ed098e	Semi-working version of extraDocs tag in annotation to refer to one capability being accessible in another Required a significant refactoring of the GATKDoclet, which now has a unified place where the ClassDoc, class, annotation, and handler are all stored together.	2011-07-23 22:07:30 -04:00
Mark DePristo	f0be7348be	Generalized handler to allow it to be used with any arbitrary class structure. DocumentedGATKFeature now includes a field for the group name. Build.xml works with public / private now.	2011-07-22 14:07:40 -04:00