Commit Graph

1 Commits (c1da8cd5e7376b70d3d2d8b8735f2140b999727c)

Author SHA1 Message Date
Mark DePristo 034a997d07 Generalized Reads -> Fragment calculation
-- Supports ReadBackedPileup -> FragmentCollection as before
-- Added support for List<SAMRecord> -> FragmentCollection for Ryan's haplotype caller
-- General cleanup, renaming, move to separate package, more extensive unit tests, etc.
-- Added toFragment() function to ReadBackedPileup interface
2011-10-26 15:54:38 -04:00