Commit Graph

3 Commits (bfbf1686cd0f71c94dea59c84b6c74c71f0ae1af)

Author SHA1 Message Date
David Roazen ea6e718cb8 SnpEff 2.0.5 support. Re-enabled SnpEff in the HybridSelectionPipeline.
For now, we recommend only running with the GRCh37.64 database.
2012-01-03 15:18:36 -05:00
David Roazen 68b2a0968c Updating the HybridSelectionPipeline for SnpEff 2.0.4 RC3
This will have to be done again when the 2.0.4 release becomes official,
but it's necessary to do now in order to re-enable the pipeline tests.
2011-11-17 14:46:12 -05:00
Khalid Shakir b090751f62 Fixed Ant / PluginManager issue where reflections was picking up all class files under current working directory due to "." in jar manifest classpaths.
Updates to HybridSelectionPipeline:
- Added annotations back via snpEff
- Minor updates to VQSR paths and lowered memory
2011-09-27 14:33:57 -04:00