b69b256003
Update pom versions to mark the start of GATK 3.4 development
2014-10-23 22:31:44 -04:00
eee94ec81f
Update pom versions for the 3.3 release
2014-10-23 22:25:17 -04:00
f766608b4e
Changed license of gsalib R package from BSD to MIT
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- PT 75827540
2014-10-16 21:37:07 -04:00
0798a4b768
Update pom versions to mark the start of GATK 3.3 development
2014-07-17 12:09:33 -04:00
323f22f852
Update pom versions for the 3.2 release
2014-07-17 12:06:22 -04:00
99026eb51b
Update VQSR Rnd BQSR script generation code for compatibility with latest ggplot version. Update queueJobReport.R and public/gsalib/src/R/R/gsa.variantqc.utils.R also
2014-07-09 15:36:58 -04:00
2c854e554a
Refactored maven directories and java packages replacing "sting" with "gatk".
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To reduce merge conflicts, this commit modifies contents of files, while file renamings are in previous commit.
See previous commit message for list of changes.
2014-05-19 17:36:39 -04:00
2d8653f493
Update pom versions to mark the start of GATK 3.2 development
2014-03-18 01:18:59 -04:00
a6a41c777c
Update pom versions for 3.1
2014-03-18 01:09:29 -04:00
9df59bd8cc
Update pom versions to mark the start of GATK 3.1 development
2014-03-06 00:05:58 -05:00
34edcb8ddf
Update pom versions for the 3.0 release
2014-03-05 23:37:21 -05:00
3848159086
Added a set of serial tests to gatk/queue packages, which runs all tests under their package in one TestNG execution.
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New properties to disable regenerating example resources artifact when each parallel test runs under packagetest.
Moved collection of packagetest parameters from shell scripts into maven profiles.
Fixed necessity of test-utils jar by removing incorrect dependenciesToScan element during packagetests.
When building picard libraries, run clean first.
Fixed tools jar dependency in picard pom.
Integration tests properly use the ant-bridge.sh test.debug.port variable, like unit tests.
2014-02-06 08:25:38 -05:00
857e6e0d6f
Bumped version to 2.8-SNAPSHOT, using new update_pom_versions.sh script.
2014-02-03 13:50:46 -05:00
caa76cdac4
Added maven pom.xmls for various artifacts.
2014-02-03 13:50:46 -05:00
d1a689af33
Added new utility files used by maven build, including the ant-bridge script.
2014-02-03 13:50:46 -05:00
faaef236ea
Moved gsalib, R and other resources, Queue GATK extensions generator, Queue version java files.
2014-02-03 13:49:21 -05:00
Geraldine Van der Auwera
Phillip Dexheimer
David Roazen
Laura Gauthier
Khalid Shakir