2 Commits (b2b4ff7eca015430b0f60f113d01ccf6078f7d96)

Author	SHA1	Message	Date
hanna	15c14add4d	Repackage the aligner for better partitioning. The C aligner, for example, is now ... partitioned from the Java aligner, and both are partitioned from the more general- purpose BWT reader. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2045 348d0f76-0448-11de-a6fe-93d51630548a	2009-11-13 22:55:27 +00:00
hanna	f73dd09399	More preparation for bwa patch: create a crude, minimal build system to build ... against a static library that the bwa compile (now) generates. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1980 348d0f76-0448-11de-a6fe-93d51630548a	2009-11-06 18:41:01 +00:00