gatk-3.8

Commit Graph

Author	SHA1	Message	Date
Mark DePristo	243af0adb1	Expanded the BQSR reporting script -- Includes header page -- Table of arguments (Arguments) -- Summary of counts (RecalData0) -- Summary of counts by qual (RecalData1) -- Fixed bug in output that resulted in covariates list always being null (updated md5s accordingly) -- BQSR.R loads all relevant libaries now, include gplots, grid, and gsalib to run correctly	2012-08-12 13:45:14 -04:00
Ryan Poplin	2be29ebd22	Merged bug fix from Stable into Unstable	2012-08-01 14:35:30 -04:00
Mark DePristo	762a3d9b50	Move BQSR.R to utils/recalibration in R	2012-07-31 08:11:04 -04:00

Author

SHA1

Message

Date

Mark DePristo

243af0adb1

Expanded the BQSR reporting script

-- Includes header page
-- Table of arguments (Arguments)
-- Summary of counts (RecalData0)
-- Summary of counts by qual (RecalData1)
-- Fixed bug in output that resulted in covariates list always being null (updated md5s accordingly)
-- BQSR.R loads all relevant libaries now, include gplots, grid, and gsalib to run correctly

2012-08-12 13:45:14 -04:00

Ryan Poplin

2be29ebd22

Merged bug fix from Stable into Unstable

2012-08-01 14:35:30 -04:00

Mark DePristo

762a3d9b50

Move BQSR.R to utils/recalibration in R

2012-07-31 08:11:04 -04:00

3 Commits (aab417c94d47f48a39dbf3dc8cf5d8d2f6280e46)