Commit Graph

4 Commits (a5a7d7dab8a9cc10c8348376c416dc1d22eda242)

Author SHA1 Message Date
depristo 30c63daf89 More improvements to the duplicate quality combiner, making progress towards a clean system
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@788 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-21 22:26:57 +00:00
hanna 01a3cb27c7 @Required / @Allows flags for main arguments.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@751 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-19 23:26:17 +00:00
depristo 2204be43eb System for traversing duplicate reads, along with a walker to compute quality scores among duplicates and a smarter method to combine quality scores across duplicates -- v1
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@624 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-07 18:06:02 +00:00
depristo 84dae06d5a Initial version of ByDuplicates traversal, as well as a duplicate quality score estimator
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@576 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-30 22:16:21 +00:00