4 Commits (9306041cf45a5f71e031ff6b6d96849486dcbda0)

Author	SHA1	Message	Date
hanna	9dbdfff786	Moved VariantEval to core. Updated integration test md5s to reflect new Analysis class names. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2762 348d0f76-0448-11de-a6fe-93d51630548a	2010-02-02 00:22:15 +00:00
ebanks	a5f75cbfd4	The previous commit broke the build, so this is a temporary patch to get it to compile. ConcordanceTruthTable should use enums (esp. now that all of the concordance variables need to be public), but VariantEval will need to be rewritten soon anyways so I'll just push it off until then. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2413 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-20 02:34:41 +00:00
chartl	b42fc905e8	Added - new tests (Hapmap was re-added) ... Modified - Hapmap now takes a -q command to filter out variants by quality Modified - MathUtils - cumBinomialProbLog now uses BigDecimal to handle some numerical imprecisions Modified - PowerBelowFrequency - returns 0.0 if called with a negative number (can't be done from inside the walker itself, but since it's called elsewhere one can't be too careful) git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2350 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-14 21:57:20 +00:00
ebanks	05923f7fba	Started transition to oneoffprojects. ... Moved/killed a few other walkers (with permission). git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2204 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-01 21:19:02 +00:00