kiran
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1d68b28bbd
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Takes a list of BAMs, looks up the read group information in the sequencing platform's SQUID database, and computes the tearsheet stats. Also takes the VariantEval output (R format) and outputs the variant stats and some plots for the tearsheet. This script requires the gsalib library to be in the R library path (add the line '.libPaths('/path/to/Sting/R/')' to your ~/.Rprofile).
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4584 348d0f76-0448-11de-a6fe-93d51630548a
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2010-10-27 19:06:22 +00:00 |