gatk-3.8

Author	SHA1	Message	Date
aaron	ea6ffd3796	initial VariantEvalWalker test. More to be added soon... Also fixed the case where MD5 sums had leading zero's clipped off git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1551 348d0f76-0448-11de-a6fe-93d51630548a	2009-09-09 01:02:04 +00:00
depristo	1c3d67f0f3	Improvements to the CountCovariates and TableRecablirator, as well as regression tests for SLX and 454 data git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1539 348d0f76-0448-11de-a6fe-93d51630548a	2009-09-04 22:26:57 +00:00
depristo	2b0d1c52b2	General WalkerTest framework. Includes some minor changes to GATK core to enable creation of true command-line like GATK modules in the code. Extensive first-pass tests for SSG git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1538 348d0f76-0448-11de-a6fe-93d51630548a	2009-09-04 19:13:37 +00:00