gatk-3.8

Author	SHA1	Message	Date
depristo	41c8552d0a	Added implements HasGenomeLocation to all revelant classes. It's not possible to write generic code for working with objects that support the getLocation() function in HasGenomeLocation. Please, if you have an object that has a location, implement this interface and start using / writing generic functions to sort, compare, etc. these objects. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5031 348d0f76-0448-11de-a6fe-93d51630548a	2011-01-20 12:54:03 +00:00
rpoplin	55eb0387ac	Another relevant qscript. I use this one to do thousands of variant recalibration jobs to search for optimal parameters. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5019 348d0f76-0448-11de-a6fe-93d51630548a	2011-01-19 18:17:32 +00:00
chartl	a463dbcda1	Refactoring the qscript directory; oneoffs, playground, and core git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5017 348d0f76-0448-11de-a6fe-93d51630548a	2011-01-19 15:23:40 +00:00