2 Commits (84563b37e565ffff86cae5dc074d4036d452fe16)

Author	SHA1	Message	Date
delangel	355396109b	Bug fix to avoid build failure (class changed under me??) ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3416 348d0f76-0448-11de-a6fe-93d51630548a	2010-05-21 18:48:56 +00:00
delangel	1753d07b02	Added AnnotationByAlleleFrequencyWalker - walker takes an input vcf, a reference vcf and a list of annotations (with the -A argument). For each site present in both VCF's, it outputs the given annotations into the screen as well as allele frequency. Since HapMap vcf reference doesn't include AF in annotations, it computes it from Chromosome, Het and HomVar counts. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3415 348d0f76-0448-11de-a6fe-93d51630548a	2010-05-21 18:31:34 +00:00