Commit Graph

4 Commits (804facb0cc4dc1a611f0bd3dbfe2b3733b1fee6a)

Author SHA1 Message Date
hanna 017ab6b690 Experimental versions of downsampler and Ryan's deduper are now available either
as walker attributes or from the command-line.  Not ready yet!  Downsampling/deduping 
works in a general sense, but this approach has not been completely optimized or validated.
Use with caution.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3392 348d0f76-0448-11de-a6fe-93d51630548a
2010-05-19 05:40:05 +00:00
hanna 0791beab8f Checking in downsampling iterator alongside LocusIteratorByState, and removing
the reference implementation.  Also implemented a heap size monitor that can
be used to programmatically report the current heap size.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3367 348d0f76-0448-11de-a6fe-93d51630548a
2010-05-17 21:00:44 +00:00
hanna 32d86cf457 Rev the reservoir downsampler to support partitioning through a functor.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3232 348d0f76-0448-11de-a6fe-93d51630548a
2010-04-21 19:50:26 +00:00
hanna c08936d6f4 Added a reservoir downsampler which can sample elements in an iterator uniformly
from a stream (see Vitter 1985).  Thanks to Eric and Andrey for the pointer.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3197 348d0f76-0448-11de-a6fe-93d51630548a
2010-04-19 20:48:14 +00:00