Commit Graph

2 Commits (7f7d7eb2d18c76ddc4b97e047e6fa9513db44e97)

Author SHA1 Message Date
carneiro 50c2fa3c3a this -1 made ALL the difference in the world. Minor bug fix.
Regular updates to the pbCalling pipeline.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5232 348d0f76-0448-11de-a6fe-93d51630548a
2011-02-11 19:25:09 +00:00
carneiro e7d38247bb chunkIntervals.lua creates 1Mb interval chunks out of any .intervals file. Useful for methods development pipeline datasets.
remapAmplicons.lua takes a sam file with reads aligned to amplicon references, a reference genome , and an amplicon reference mapping table, and rewrites the sam file with mappings to the reference sequence.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5230 348d0f76-0448-11de-a6fe-93d51630548a
2011-02-11 18:21:31 +00:00