Commit Graph

1 Commits (7a4a5a17c0c025e70666b5847b8df7cc90cbe188)

Author SHA1 Message Date
kcibul ce72932a45 * refactored GenomeLoc to use contigIndex internally for performance and fixed several calling classes
* added basic unit test for GenomeLoc
* fixed bug when parsing genome locations like chr1:5000 the start position was being left as maxint rather than being set to the same as the stop position.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@365 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-12 02:25:17 +00:00