rpoplin
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7185fcb47b
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Committing my notes about the methods development pipeline so we stay synced up while I'm on vacation. Cheers.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4891 348d0f76-0448-11de-a6fe-93d51630548a
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2010-12-21 21:14:20 +00:00 |
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rpoplin
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4ca1da1d07
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Updating the NA12878.HiSeq bam file to be the correct bam file in the methods development qscript.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4879 348d0f76-0448-11de-a6fe-93d51630548a
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2010-12-20 14:53:10 +00:00 |
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rpoplin
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8fac346ac1
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Misc cleanup in Methods Development Qscript
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4878 348d0f76-0448-11de-a6fe-93d51630548a
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2010-12-20 04:24:25 +00:00 |
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rpoplin
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34ab5b4889
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Turning on BAQ in Methods Development pipeline. A new dataset is added: 363 EUR samples from the November 1000G release.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4877 348d0f76-0448-11de-a6fe-93d51630548a
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2010-12-19 21:13:25 +00:00 |
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rpoplin
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15a33545f4
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Updating Methods development pipeline qscript with the bam lists for all the data sets. It is ready for people to start running with it.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4875 348d0f76-0448-11de-a6fe-93d51630548a
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2010-12-18 22:19:14 +00:00 |
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rpoplin
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bdef4e775a
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Initial checkin of methods development pipeline qscript. It allows the methods dev team to run an overnight job which calls and recalibrates a variety of data sets and allows for an end-to-end sanity check of final results for potential changes to the methods. It isn't meant to be used by anybody quite yet, but shows the general structure and flow.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4871 348d0f76-0448-11de-a6fe-93d51630548a
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2010-12-17 22:14:02 +00:00 |