gatk-3.8

Commit Graph

Author	SHA1	Message	Date
Khalid Shakir	6d6149b9a2	Updated gsalib gsa.read.gatkreport to return all reports, even those beginning with '.'. In PreQC using geom_blank() so MEDIAN_INSERT_SIZE plot doesn't crash on facet_grid(scales='free') when data doesn't contain points for 'RF' or 'TANDEM'.	2011-10-05 18:30:40 -04:00
Khalid Shakir	5dcac7b064	GATKReport v0.2: - Floating point column widths are measured correctly - Using fixed width columns instead of white space separated which allows spaces embedded in cell values - Legacy support for parsing white space separated v0.1 tables where the columns may not be fixed width - Enforcing that table descriptions do not contain newlines so that tables can be parsed correctly Replaced GATKReportTableParser with existing functionality in GATKReport	2011-08-03 00:24:47 -04:00
Kiran V Garimella	ca35defdcd	Moved gsalib sources from private/ to public/	2011-07-27 12:29:43 -04:00

Author

SHA1

Message

Date

Khalid Shakir

6d6149b9a2

Updated gsalib gsa.read.gatkreport to return all reports, even those beginning with '.'.

In PreQC using geom_blank() so MEDIAN_INSERT_SIZE plot doesn't crash on facet_grid(scales='free') when data doesn't contain points for 'RF' or 'TANDEM'.

2011-10-05 18:30:40 -04:00

Khalid Shakir

5dcac7b064

GATKReport v0.2:

- Floating point column widths are measured correctly
- Using fixed width columns instead of white space separated which allows spaces embedded in cell values
- Legacy support for parsing white space separated v0.1 tables where the columns may not be fixed width
- Enforcing that table descriptions do not contain newlines so that tables can be parsed correctly
Replaced GATKReportTableParser with existing functionality in GATKReport

2011-08-03 00:24:47 -04:00

Kiran V Garimella

ca35defdcd

Moved gsalib sources from private/ to public/

2011-07-27 12:29:43 -04:00

3 Commits (6eb87bf58a60e65abf89f7096ecbe06bef790ee4)