8 Commits (6cf413e630b4e8d6e69299348fb40c7f45bcdbfa)

Author	SHA1	Message	Date
depristo	090212c1c2	Home for retired duplicateQuals analysis utility ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2517 348d0f76-0448-11de-a6fe-93d51630548a	2010-01-06 15:05:00 +00:00
asivache	cf3e59eb4a	back to archive ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2478 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-29 22:00:38 +00:00
asivache	295d16572e	synch; will go back to archive in a sec ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2477 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-29 22:00:03 +00:00
ebanks	2de7e1a178	Move VariantAnnotator over to use a StratifiedAlignmentContext split by sample. ... The only major difference is that we are now able to get accurate allele balance ratios. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2321 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-11 05:28:28 +00:00
ebanks	9da5cc25ad	More archiving (with permission from Andrey) plus a move to core. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2242 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-03 15:40:27 +00:00
ebanks	05923f7fba	Started transition to oneoffprojects. ... Moved/killed a few other walkers (with permission). git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2204 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-01 21:19:02 +00:00
ebanks	084337087e	Removing deprecated code and walkers for which I had the green light from repository. ... Moved piecemealannotator and secondarybases to archive. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2195 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-01 05:58:20 +00:00
ebanks	2c16c18a04	Move Andrey's old indel code (plus MSG accuracy test, which depends on it) to archive. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2194 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-01 05:29:00 +00:00