4 Commits (608fa4cc3ae8c0349102325f36ad68c8bdf45443)

Author	SHA1	Message	Date
ebanks	01cf5cc741	1. Merged CoverageHistogram into DepthOfCoverageWalker ... 2. Fixed bug in histogram calculation for small intervals 3. Better output in DoCWalker 4. Comments added to code git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2245 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-03 17:01:53 +00:00
ebanks	44b9f60735	PercentOfBasesCovered functionality moved to DepthOfCoverageWalker. Added integration tests. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2244 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-03 16:11:09 +00:00
ebanks	a88202c3f6	Refactored DoCWalker to output in a more helpful and usable style. It now outputs in tabular format with 2 different sections: per locus and then per interval. ... I am now at a point where I can merge the functionality from other coverage walkers into this one. Thanks to Andrew for input. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2239 348d0f76-0448-11de-a6fe-93d51630548a	2009-12-03 05:28:21 +00:00
depristo	d9588e6083	bug fixes to LIBS and LIBH following ultra-aggressive regression testing across 454, solid, and solexa ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1558 348d0f76-0448-11de-a6fe-93d51630548a	2009-09-09 15:36:12 +00:00