rpoplin
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5f58492401
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A rogue QualityUtils.MAX_REASONABLE_Q_SCORE managed to get through my previous bug fix. It should instead check the command line -maxQ argument.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2540 348d0f76-0448-11de-a6fe-93d51630548a
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2010-01-07 21:17:39 +00:00 |
alecw
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159778416c
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In TableRecalibrationWalker, update UQ tag if it was present in the original SAMRecord. This required a new sam.jar, which caused some other files to need to be changed.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@2435 348d0f76-0448-11de-a6fe-93d51630548a
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2009-12-23 21:42:36 +00:00 |
aaron
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eb962fe52a
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adding an artificial sam file writer, used to unit test some of the walkers (mainly the PrintReadsWalker)
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@956 348d0f76-0448-11de-a6fe-93d51630548a
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2009-06-09 21:47:49 +00:00 |