3 Commits (5f10fffa471f68781ce3d313ad1a9cd45d8c6f40)

Author	SHA1	Message	Date
carneiro	5f10fffa47	merge intervals now prints a sorted list in the end. ... added the ccs datasets to the pbCalling pipeline. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5233 348d0f76-0448-11de-a6fe-93d51630548a	2011-02-11 20:57:59 +00:00
carneiro	aab0ec209b	small bug fix on chromosome names. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5168 348d0f76-0448-11de-a6fe-93d51630548a	2011-02-01 20:55:19 +00:00
carneiro	a2e2a6a9c3	A script to convert an intervals file into a sorted unoverlapping intervals file. Super fast implementation using multiple hashes, should do the job instantly no matter how big the intervals are. ... ps: this utility is similar to -im on GATK, but for queue scripts we need the intervals file fixed before we can run Unified Genotyper because of scatter-gather. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5117 348d0f76-0448-11de-a6fe-93d51630548a	2011-01-28 21:46:41 +00:00