Commit Graph

11 Commits (5451bbfd5a3f744e2ebeaf2e13d30cf84e88cf3e)

Author SHA1 Message Date
hanna ad80894afa Bumped picard to latest svn version.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@965 348d0f76-0448-11de-a6fe-93d51630548a
2009-06-10 14:36:34 +00:00
hanna 5e8c08ee63 Update to latest version of picard. Change imports in all classes dependent on picard public from import edu.mit.broad.picard... to import net.sf.picard...
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@849 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-28 20:13:01 +00:00
hanna aa17c4a468 Farewell, functionalj. You promised much, but you could not deliver.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@847 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-28 01:35:49 +00:00
hanna 4ab9bfe662 Upped sam-jdk jar to new version in public picard repository.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@739 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-17 15:03:05 +00:00
hanna 8cce3d908f Bumped sam to latest.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@690 348d0f76-0448-11de-a6fe-93d51630548a
2009-05-13 19:19:55 +00:00
hanna a573b8ede1 Bumped sam-jdk version to fix bug unzipping bam files.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@554 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-28 20:02:05 +00:00
hanna feebd8cd55 Latest version of sam.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@436 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-15 21:02:25 +00:00
hanna 8efedacabf Bump sam jdk to svn rev 207.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@340 348d0f76-0448-11de-a6fe-93d51630548a
2009-04-08 22:16:46 +00:00
hanna 067ae09cd0 Bump picard and samtools to latest.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@207 348d0f76-0448-11de-a6fe-93d51630548a
2009-03-27 02:26:28 +00:00
hanna 6e2d939905 Added subversion rev 180 of the sam library.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@120 348d0f76-0448-11de-a6fe-93d51630548a
2009-03-20 20:17:51 +00:00
hanna 1096bbd4d9 Moved build.xml, ivy.xml and settings to root of Sting repository.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@88 348d0f76-0448-11de-a6fe-93d51630548a
2009-03-18 19:13:19 +00:00