3 Commits (5429b4d4a86955642063660552f43c0a8b18adff)

Author	SHA1	Message	Date
ebanks	3c4410f104	-add basic indel metrics to variant eval ... -variants need a length method (can't assume it's a SNP)! git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1324 348d0f76-0448-11de-a6fe-93d51630548a	2009-07-28 03:25:03 +00:00
aaron	bcb64d92e9	Aaron: 1, GenomeLoc: 0. I changed our GenomeLoc class, seperating the creation of a genome loc (with the reference setup) to a parser class. GenomeLoc now just represents the actual genomic postion. The constructors are now package-protected (to enforce using the parser), but we may want to expose some constructors in the future. ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@1069 348d0f76-0448-11de-a6fe-93d51630548a	2009-06-22 14:39:41 +00:00
ebanks	032d0436e6	Added ROD for 1KG SNP calls ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@988 348d0f76-0448-11de-a6fe-93d51630548a	2009-06-11 19:53:51 +00:00