48055d45cb
Added support for PICARD functions to QUEUE after following Khalid's pointers on where to do it. I have added the 6 functions used by the Data Processing Pipeline, but from now on it should be a matter of seconds to copy/paste and create bindings to more functions.
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Updated the Data Processing Pipeline to use the new Picard classes and reorganized the pre-processing of the pipeline accordingly.
Will only update the wiki once this change goes live.
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@6071 348d0f76-0448-11de-a6fe-93d51630548a
2011-06-22 22:56:14 +00:00
c8124496d0
now with the new 'consensus model' parameter to the cleaner.
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git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@6064 348d0f76-0448-11de-a6fe-93d51630548a
2011-06-22 22:55:42 +00:00
95f3da1126
limiting the number of reads in memory for the SamValidateFile.jar
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git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5976 348d0f76-0448-11de-a6fe-93d51630548a
2011-06-10 20:14:30 +00:00
32ac7be86a
new name to the pipeline, it's now in core, happy to support it.
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ps: Can't wait for GIT !
git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5933 348d0f76-0448-11de-a6fe-93d51630548a
2011-06-02 23:34:54 +00:00
droazen
carneiro