gatk-3.8

Commit Graph

Author	SHA1	Message	Date
Mark DePristo	1200848bbf	Part II of GSA-462: Consistent RODBinding access across Ref and Read trackers -- Deleted ReadMetaDataTracker -- Added function to ReadShard to give us the span from the left most position of the reads in the shard to the right most, which is needed for the new view	2012-08-30 10:15:10 -04:00
Eric Banks	79195b97a3	Adding categories for the remaining uncategorized walkers	2012-07-30 11:35:08 -04:00
Mauricio Carneiro	116885a450	Removed the "Walker" suffix from all walkers that had it. * Did not touch archived walkers... those can be named whatever. * Kept abstract classes that end in Walker untouched (e.g. LocusWalker, ReadWalker, ...) * Renamed a few inner classes due to conflict when stripping off Walker from their outer classes: ContigStats, FlagStats and FastaStats.	2012-07-20 17:27:11 -04:00

Author

SHA1

Message

Date

Mark DePristo

1200848bbf

Part II of GSA-462: Consistent RODBinding access across Ref and Read trackers

-- Deleted ReadMetaDataTracker
-- Added function to ReadShard to give us the span from the left most position of the reads in the shard to the right most, which is needed for the new view

2012-08-30 10:15:10 -04:00

Eric Banks

79195b97a3

Adding categories for the remaining uncategorized walkers

2012-07-30 11:35:08 -04:00

Mauricio Carneiro

116885a450

Removed the "Walker" suffix from all walkers that had it.

* Did not touch archived walkers... those can be named whatever.
   * Kept abstract classes that end in Walker untouched (e.g. LocusWalker, ReadWalker, ...)
   * Renamed a few inner classes due to conflict when stripping off Walker from their outer classes: ContigStats, FlagStats and FastaStats.

2012-07-20 17:27:11 -04:00

3 Commits (46c7ea834da9c2f0c3b40d0a0f88f15d590cd968)