gatk-3.8

Commit Graph

Author	SHA1	Message	Date
kshakir	4d611e53e7	Passing the ADPR R script to FCPTest. Changed the FCP.q to use an InProcessFunction work around the -runDir issue GSA-420. Tested the FCPTest using the following dotkits and "ant clean pipelinetest -Dpipeline.run=run": - R-2.11 - Oracle-full-client - .cx-oracle-5.0.2-python-2.6.5-oracle-full-client-11.1 git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5029 348d0f76-0448-11de-a6fe-93d51630548a	2011-01-20 06:08:45 +00:00
corin	50fcebb0c4	Incorporates tearsheet and plot production with database access into standard pipeline. Note that the following dotkit packages must be run before the adpr will be correctly generated: R-2.10, Oracle-full-client, cx-oracle-5.0.2-python-2.6.5-oracle-full-client-11.1 This also removes the unused titv argument git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5024 348d0f76-0448-11de-a6fe-93d51630548a	2011-01-19 20:48:42 +00:00
chartl	a463dbcda1	Refactoring the qscript directory; oneoffs, playground, and core git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5017 348d0f76-0448-11de-a6fe-93d51630548a	2011-01-19 15:23:40 +00:00

Author

SHA1

Message

Date

kshakir

4d611e53e7

Passing the ADPR R script to FCPTest.

Changed the FCP.q to use an InProcessFunction work around the -runDir issue GSA-420.
Tested the FCPTest using the following dotkits and "ant clean pipelinetest -Dpipeline.run=run":
  - R-2.11
  - Oracle-full-client
  - .cx-oracle-5.0.2-python-2.6.5-oracle-full-client-11.1


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5029 348d0f76-0448-11de-a6fe-93d51630548a

2011-01-20 06:08:45 +00:00

corin

50fcebb0c4

Incorporates tearsheet and plot production with database access into standard pipeline. Note that the following dotkit packages must be run before the adpr will be correctly generated:

R-2.10, 
Oracle-full-client, 
cx-oracle-5.0.2-python-2.6.5-oracle-full-client-11.1

This also removes the unused titv argument


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5024 348d0f76-0448-11de-a6fe-93d51630548a

2011-01-19 20:48:42 +00:00

chartl

a463dbcda1

Refactoring the qscript directory; oneoffs, playground, and core

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@5017 348d0f76-0448-11de-a6fe-93d51630548a

2011-01-19 15:23:40 +00:00

3 Commits (41c8552d0acdb2bd29f337af56fff9900c69c8ff)