gatk-3.8

Commit Graph

Author	SHA1	Message	Date
hanna	d773b3264b	Eliminated -mrl option. Eliminated -fmq0 option. Eliminated read group hallucination. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4133 348d0f76-0448-11de-a6fe-93d51630548a	2010-08-26 21:38:03 +00:00
hanna	5050b19457	We're unable to make the naive deduper more worldly, so we're killing it instead. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3587 348d0f76-0448-11de-a6fe-93d51630548a	2010-06-18 13:54:27 +00:00
hanna	017ab6b690	Experimental versions of downsampler and Ryan's deduper are now available either as walker attributes or from the command-line. Not ready yet! Downsampling/deduping works in a general sense, but this approach has not been completely optimized or validated. Use with caution. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3392 348d0f76-0448-11de-a6fe-93d51630548a	2010-05-19 05:40:05 +00:00

Author

SHA1

Message

Date

hanna

d773b3264b

Eliminated -mrl option.

Eliminated -fmq0 option.
Eliminated read group hallucination.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4133 348d0f76-0448-11de-a6fe-93d51630548a

2010-08-26 21:38:03 +00:00

hanna

5050b19457

We're unable to make the naive deduper more worldly, so we're killing it instead.

git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3587 348d0f76-0448-11de-a6fe-93d51630548a

2010-06-18 13:54:27 +00:00

hanna

017ab6b690

Experimental versions of downsampler and Ryan's deduper are now available either

as walker attributes or from the command-line.  Not ready yet!  Downsampling/deduping 
works in a general sense, but this approach has not been completely optimized or validated.
Use with caution.


git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3392 348d0f76-0448-11de-a6fe-93d51630548a

2010-05-19 05:40:05 +00:00

3 Commits (4183e8805a3ada02011786160f830e8424cf57d0)