3 Commits (3093a20a5544845c97e4917d492878010778b5cd)

Author	SHA1	Message	Date
aaron	3093a20a55	fixing VCF header format and info fields so that they propery emit the unbounded count value correctly for vcf4 or vcf3. Eric we should update the vcf4 spec page to indicate format fields are allowed to use the unbounded count as well (if this is true). ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3707 348d0f76-0448-11de-a6fe-93d51630548a	2010-07-01 22:02:16 +00:00
delangel	3ca2b7374b	Fixes to better deal with the "Type" and "Number" field in the INFO and FORMAT header lines in VCF4.0. We now record these fields and provide appropriate conversions. This is the first version that passes fully the VCF validator. ... Also, moved the flag indicating VCF4.0 to the VCFWriter constructor. git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3669 348d0f76-0448-11de-a6fe-93d51630548a	2010-06-29 16:43:00 +00:00
aaron	d3848745ab	moving VCF 3.3 back into the GATK so Guillermo can make changes for VCF 4 output ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@3639 348d0f76-0448-11de-a6fe-93d51630548a	2010-06-25 18:20:06 +00:00