Commit Graph

5 Commits (2edb286d1c43d99d37ab8a78d8fa4f61cf7330a4)

Author SHA1 Message Date
Mauricio Carneiro 2a4ccfe6fd Updated all JAVA file licenses accordingly
GSATDG-5
2013-01-10 17:06:41 -05:00
Eric Banks 1acf0f0b2c Fixing bug in fasta .fai generation: trim the contig names to the first whitespace if one appears. We now generate indexes identical to samtools. 2012-08-29 22:36:27 -04:00
Eric Banks 3253fc216b FindBugs 'Maintainability' fixes 2012-08-16 15:53:06 -04:00
Mark DePristo f3ad4ec94b Removed annoying FastaSequenceIndexBuilderProgressListener infrastructure that was just a boolean switch on whether to print progress or not. 2011-07-27 22:06:23 -04:00
David Roazen 3c9497788e Reorganized the codebase beneath top-level public and private directories,
removing the playground and oneoffprojects directories in the process. Updated
build.xml accordingly.
2011-06-28 06:55:19 -04:00