2c854e554a
Refactored maven directories and java packages replacing "sting" with "gatk".
...
To reduce merge conflicts, this commit modifies contents of files, while file renamings are in previous commit.
See previous commit message for list of changes.
2014-05-19 17:36:39 -04:00
41d70abe4e
At chartl's request, add the bwa aln -N and bwa aln -m parameters to the bindings.
2012-01-17 14:47:53 -05:00
f50145b872
Reinitialize random seed in the bwa bindings from the fixed seed stored in the
...
BWA support files every time the support files are loaded.
2011-07-22 13:41:53 -04:00
92c7cfa1c8
BWA bindings and tests moved to public (was required for ValidationAmplicons)
...
Integration tests for ValidationAmplicons. New argument to disable BWA, lowercase letters only for repetitiveness instead.
2011-07-19 20:11:31 -04:00
Khalid Shakir
Matt Hanna
Christopher Hartl