gatk-3.8

Commit Graph

Author	SHA1	Message	Date
Karthik Gururaj	25aecb96e0	Added support for dynamic selection between AVX and un-vectorized C++, still to include SSE code from Mohammad. Debug flags turned on in this commit.	2014-01-18 11:07:23 -08:00
Karthik Gururaj	d7ba1f1c28	1. Moved computeLikelihoods from PairHMM to native implementation 2. Disabled debug - debug code still left (hopefully, not part of bytecode) 3. Added directory PairHMM_JNI in the root which holds the C++ library that contains the PairHMM AVX implementation. See PairHMM_JNI/JNI_README first	2014-01-16 21:36:15 -08:00

Author

SHA1

Message

Date

Karthik Gururaj

25aecb96e0

Added support for dynamic selection between AVX and un-vectorized C++,

still to include SSE code from Mohammad.
Debug flags turned on in this commit.

2014-01-18 11:07:23 -08:00

Karthik Gururaj

d7ba1f1c28

1. Moved computeLikelihoods from PairHMM to native implementation

2. Disabled debug - debug code still left (hopefully, not part of
bytecode)
3. Added directory PairHMM_JNI in the root which holds the C++ library
that contains the PairHMM AVX implementation. See PairHMM_JNI/JNI_README
first

2014-01-16 21:36:15 -08:00

2 Commits (25aecb96e098664e3ca472afdc8a93657ec52317)