4 Commits (09c7ea879d98a22d3146b009c25f44cd69a822bb)

Author	SHA1	Message	Date
chartl	80770dc032	Expanded target pipeline complete. Stop trying to be clever about scatter-gather; wait until functional SG is built-in to Q. Til then, a lazy version of the fullCallingPipeline. Seems to take a long time to generate the graph though... ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4888 348d0f76-0448-11de-a6fe-93d51630548a	2010-12-21 00:56:16 +00:00
chartl	fc33901810	Graph structure must be known at compile time. Removing GroupIntervals until a future point where in-process-functions can predict their output based on inputs [though this is probably forever: the inputs may not exist at compile time!] ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4886 348d0f76-0448-11de-a6fe-93d51630548a	2010-12-20 21:22:58 +00:00
chartl	61d5daa65c	EXTREME interval processing. Still undergoing testing. ... + GroupIntervals allows user-defined scattering (e.g. take an interval list file, split it into k smaller interval list files by number of lines) + ExpandIntervals expands the intervals, either by widening them, or allowing the definition for nearby intervals (e.g. flanks starting 1bp before and after, ending 10bp after that) + IntersectIntervals takes n interval lists, writes 1 interval list that is the n-way intersection of all of them git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4885 348d0f76-0448-11de-a6fe-93d51630548a	2010-12-20 19:42:50 +00:00
chartl	8118a439c0	Commit for Khalid ... git-svn-id: file:///humgen/gsa-scr1/gsa-engineering/svn_contents/trunk@4876 348d0f76-0448-11de-a6fe-93d51630548a	2010-12-18 22:24:18 +00:00